Building a Multi-User Database to Enhance Management of Genetic Fingerprints of Potato Varieties Produced as Seed in France

This paper describes the development of IdeAle, a secure online multi-user database for managing SSR-based genetic fingerprints of potato seed varieties in France, hosting profiles of 939 varieties and 342 hybrids across 30 markers.

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Opis

The study reports the design and implementation of IdeAle, a secure web-based database that supports collaborative management of SSR marker profiles for potato seed certification. It integrates data from five French laboratories, storing genetic fingerprints of 939 cultivars and 342 hybrids using 30 SSR markers, representing 551 alleles. The platform ensures encrypted data exchange and professional hosting. Since deployment, 1483 profiles have been published, and analysis of INRA’s collection added 10 novel alleles. The system’s marker transferability across different genotyping platforms was evaluated to ensure interoperability.

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Szczegółowe informacje

Projekt

Innovations agronomiques

Innovations agronomiques

Lokalizacja
France
Autorzy
Sylvie MARHADOUR, Catherine DARGIER, Florence ESNAULT, Nicolas LAVERSIN, Amandine MÉAR, Michel PERRAMANT et Yves LE HINGRAT
Cel
Adopt innovative practices

Typ pliku
dokument
Utworzono dnia
01 maj 2014
Język oryginału
French
Oficjalna strona projektu
Innovations agronomiques
Licencja
CC BY